Wenying Yan, Huangqion Zhu, Yang Yang, Jiajia Chen, Yuanyuan Zhang and Bairong Shen*
for Systems Biology, Postbox 206,
All the related R scripts used in this article are listed as follows.
1. Reconstruction of the the Arabidopsis gene regulatory networks by R package G1DBN.
2. Network Structure Analysis: diameter, average path length, Centralization, Clustering coefficient, etc.
3. Calculation of sensitivity, precision and F_measure.
4. Identification of the edges (gene regulations) which exists in more than one networks and calculation of the number of overlapping edges among different networks.