| Recommendation |
ID |
Data Information |
Model Information |
Application Information |
Reference |
| Rank |
Total_Score |
Model_ID |
Dataset_Name |
Element_type |
Data_features |
Model_name |
Algorithm_name |
Prediction_type |
Code_source |
Study_types |
Disease_name |
Target_name |
Drug_name |
Interaction_type |
Recommended_Number |
PMID |
Journal |
Publication_Year |
| 1 |
80.7 |
1994 |
KIBA |
Drug, Target |
Drug: SMILES, Target: the amino acid sequences |
MSGNN-DTA |
Graph Neural Network (GNN) |
Drug Target binding Affinity (DTA) |
https://github.com/songxuanmo/MSGNN-DTA |
Case studies |
NA |
Epidermal Growth Factor Receptor (EGFR) |
NA |
NA |
Top 11 drugs |
37176031 |
Int J Mol Sci |
2023 |
| 2 |
77.875 |
2079 |
KIBA |
Drug, Target |
Drug: SMILES, Target: the amino acid sequences |
MULGA (Multi-view Learning and Graph Autoencoder framework) |
Multi-view Learning and Graph Autoencoder (GAE) |
Drug Target Interaction (DTI) |
https://github.com/jianiM/MULGA |
Case studies |
COVID-19 |
Spike glycoprotein |
NA |
NA |
Top 20 drugs |
37610353 |
Bioinformatics |
2023 |
| 3 |
76.3 |
2145 |
KIBA |
Drug, Target |
Drug: SMILES, Target: The amino acid Sequence. |
MdDTI |
Multi Layer Perception (MLP) |
Drug Target Interaction (DTI) |
https://github.com/lhhu1999/MdDTI |
Case studies |
COVID-19 |
SARS-CoV-2 3C-like protease |
NA |
NA |
Top 5 drugs |
37844375 |
Comput Biol Chem |
2023 |
| 4 |
76 |
2093 |
KIBA |
Drug, Target |
Drug: SMILES, Target: the amino acid sequences |
DGDTA |
Graph Attention Network (GAT),Graph Convolutional Network (GCN),Bidirectional Long Short-Term Memory (Bi-LSTM),Multilayer Convolutional Network |
Drug Target binding Affinity (DTA) |
https://github.com/luojunwei/DGDTA |
Case studies |
NA |
Receptor Tyrosine Kinases (RTKs) |
NA |
NA |
Top 1 drug |
37777712 |
BMC Bioinformatics |
2023 |
| 5 |
73.2 |
1981 |
KIBA |
Drug, Target |
Drug: SMILES, Target: the amino acid sequences |
GIFDTI |
Convolutional Neural Network (CNN),Transformer |
Drug Target Interaction (DTI) |
https://github.com/zhaoqichang/GIFDTI |
Case studies |
NA |
Epidermal Growth Factor Receptor (EGFR) |
NA |
NA |
Top 20 drugs |
36445997 |
IEEE/ACM Trans Comput Biol Bioinform |
2023 |
| 5 |
73.2 |
1981 |
KIBA |
Drug, Target |
Drug: SMILES, Target: the amino acid sequences |
GIFDTI |
Convolutional Neural Network (CNN),Transformer |
Drug Target Interaction (DTI) |
https://github.com/zhaoqichang/GIFDTI |
Case studies |
NA |
NA |
Fludiazepam |
NA |
Top 20 targets |
36445997 |
IEEE/ACM Trans Comput Biol Bioinform |
2023 |
| 6 |
60 |
2001 |
KIBA |
Drug, Target |
NA |
BindingSite-AugmentedDTA |
Graph Neural Network (GNN) |
Drug Target binding Affinity (DTA) |
https://github.com/yazdanimehdi/BindingSite-AugmentedDTA |
Case studies |
COVID-19 |
SARS-CoV-2 (3C-like protease, RNA-dependent RNA polymerase(RdRp), helicase, Spike/ACE2 complex) |
NA |
NA |
Top 10 drugs |
37096593 |
Brief Bioinform |
2023 |
| 7 |
57 |
2144 |
KIBA |
Drug, Target |
Drug: SMILES, Target: The amino acid Sequence. |
TeM-DTBA (Time-efficient Multimodal Drug Target Binding Affinity) |
Multi Layer Perception (MLP) |
Drug Target binding Affinity (DTA) |
https://github.com/hkmztrk/DeepDTA/tree/master/data. |
NA |
NA |
NA |
NA |
NA |
NA |
37777631 |
J Comput Aided Mol Des |
2023 |
| 8 |
55 |
1674 |
KIBA |
Drug, Target |
Drug: SMILES, Target: the amino acid sequences |
Affinity2Vec |
XGBoost |
Drug Target binding Affinity (DTA) |
https://github.com/MahaThafar/Affinity2Vec |
NA |
NA |
NA |
NA |
NA |
NA |
35306525 |
Sci Rep |
2022 |
| 9 |
51 |
1678 |
KIBA |
Drug, Target |
Drug: 2D chemical structure, Target: sequence |
NerLTR-DTA |
Learning To Rank (LTR) |
Drug Target binding Affinity (DTA) |
https://github.com/RUXIAOQING964914140/NerLTR-DTA |
NA |
NA |
NA |
NA |
NA |
NA |
35134828 |
Bioinformatics |
2022 |
| 10 |
50 |
1343 |
KIBA |
Drug, Target |
Drug: (the atom symbol, the number of adjacent atoms, the number of adjacent hydrogens, the implicit value of the atom, and whether the atom is in an aromatic structure), Target: (ASCII character string) |
GraphDTA |
Graph Neural Network (GNN) |
Drug Target binding Affinity (DTA) |
https://github.com/thinng/GraphDTA |
NA |
NA |
NA |
NA |
NA |
NA |
33119053 |
Bioinformatics |
2021 |